Germany has also called on Turkey to accept the repatriations as part of a 2016 agreement between Ankara and the EU. A recent upswell in illegal crossings has led to rapidly deteriorating conditions in Greek camps.
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Germany's Interior Ministry on Thursday called for Greece to step up deportations to Turkey, as well as for stronger efforts in stemming the flow of illegal crossings to Greek islands in the first place.
Stephan Mayer, the parliamentary secretary of the Interior Ministry, said, "We urgently need to make progress in small repatriations to Turkey, to improve the deteriorating conditions at certain hot spots on the islands."
Speaking with the Funke Mediengruppe news publisher, Mayer described the situation on the Greek destinations closest to Turkey as "very difficult."
More and more migrants have been crossing to Greece in recent weeks, overwhelming the already strapped local services.
Greece's new conservative Prime Minister Kyriakos Mitsotakis had earlier praised deportation efforts, saying they were improving, however, the EU Commission has said there was still much more work to be done.
Mayer insisted that there be a more "comprehensive implementation" of a 2016 EU-Turkey migration pact meant to keep migrants from taking the often perilous journey to Greece. At least 1,163 people died during the crossing between March 2015 and March 2016.
German Foreign Minister Heiko Maas told DW that he had "spoken with my Turkish counterpart Mevlut Cavusoglu this week and reminded him that the European Union was honoring its parts of the EU-Turkey deal, and we have to assume Turkey is too."
The pact, meant to curtail human trafficking and prevent deaths in the Aegean Sea, included billions of euros in aid to Ankara and the agreement that refugees be immediately returned to Turkey.
Since that deal was struck, only 1,904 people have been deported to Turkey, while 24,348 Syrians who arrived in Europe via Turkey have been settled in EU countries.
The government has said Merkel spoke to Turkish President Recep Tayyip Erdogan about the situation over the phone on Wednesday, following a threat from Erdogan on Saturday that he would reopen the borders to Europe for Syrian refugees.
Moria refugee camp: A new kind of hell awaits
This year, so far, has seen a huge influx of refugees arriving in Lesbos. Conditions in the Moria camp are steadily becoming worse and refugees are often left to their own devices.
Image: DW/D. Tosidis
A view from above
Moria refugee camp has a capacity of 3,000. Currently, some 14,500 refugees are squeezed into the infamous refugee camp, Greece's largest reception and identification center.
Image: DW/D. Tosidis
Deep wounds
A large majority of those who live in Moria have been deemed as vulnerable and are in need of immediate medical assistance. This girl from Gaza, who lives with her family in a tent in the olive grove outside Moria, was severely injured when an Israeli rocket hit her home.
Image: DW/D. Tosidis
A false dawn?
In August more than 2,800 people arrived in dinghies on the island of Lesbos. A boat carrying 40 people was brought into the port of Skala Sikamineas after it was intercepted by Frontex, the EU's border agency. Eight women and 18 children, including five unaccompanied minors, were on board along with 14 men, all from Afghanistan.
Image: DW/D. Tosidis
The wait begins
After the women and children have been transferred to a transit camp, 18 men wait to be taken away to the same camp by the authorities. Volunteers with the NGO Lighthouse relief assist the authorities in providing food and water to those who have recently arrived.
Image: DW/D. Tosidis
Keeping the tradition alive
An Afghan woman makes bread in a makeshift underground oven which she then sells for €1 ($1.10) to other refugees. Due to deteriorating conditions and food provisions that are below standard quality many refugees who remain for long in the camp of Moria have found new ways to pass the day and remember home.
Image: DW/D. Tosidis
A soothing hand
Countless refugees need urgent medical attention. Doctors without Borders operate an emergency clinic opposite Moria for the most urgent cases, as the main camp currently only has one doctor and the hospital of Mytilene is overwhelmed and in some cases unwilling to treat refugees.
Image: DW/D. Tosidis
Discarded dreams
A "graveyard" of life jackets and boats on the island's north is a stark reminder of the last huge influx of refugees in 2015/16. Lesbos has been at the center of the refugee crisis for years as thousands of people have landed on its shores. Currently there are more than 11,000 refugees spread across the islands. That number is expected to rise sharply by the end of the year.
Image: DW/D. Tosidis
Monotonous routine
Waiting in line has become the main daily activity for those stuck in Moria limbo — even for children. Some wait for hours in order to receive food and water.
Image: DW/D. Tosidis
From the frying pan into the fire
A group of refugees prepares to board a ship which will take them to mainland Greece. After the sudden arrival of 600 people in one night, the Greek government decided to transfer 1,400 people to the mainland. Most were taken to the camp of Nea Kavala in a remote village in northern Greece.